SpliceTools

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Example input files

Skipped Exon Retained Intron Gene Expression

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SpliceSiteScore

Splice Site Scoring

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Intron and Exon Sizes

Fraction expressed

Fraction of Expressed Genes

Fraction unannotated

Fraction Unannotated

Splice Compare

Splice Compare

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NMD, Neopeptides, Domain Function

Number skipped

Number of Exons Skipped

SpliceTools by Flemington et. al. Source code on GitHub

Published in Nucleic Acids Research
Erik K Flemington, Samuel A Flemington, Tina M O’Grady, Melody Baddoo, Trang Nguyen, Yan Dong, Nathan A Ungerleider. SpliceTools, a suite of downstream RNA splicing analysis tools to investigate mechanisms and impact of alternative splicing, Nucleic Acids Research, 2023; gkad111, https://doi.org/10.1093/nar/gkad111